Insertion junction: LMJ.RY0402.228939_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.228939
Chromosome:chromosome 16
Location:4850653
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g686100 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACATCGCCGACTCCTCAAGCCTTGTTG
Internal bar code:TGATTCGCGTCGGTCGCCCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:612
LEAP-Seq percent confirming:98.7437
LEAP-Seq n confirming:786
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGCGTTGCCCGTGTAAT
Suggested primer 2:GCTATAGCAGAGCTGGGGTG