Insertion junction: LMJ.RY0402.228939_5

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.228939
Chromosome:chromosome 16
Location:4850655
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g686100 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTTCTTTCATGCGACCGGGTGGTGTGT
Internal bar code:GATCGTAAGACACAAGGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:462
LEAP-Seq percent confirming:99.6345
LEAP-Seq n confirming:6269
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGCGTTGCCCGTGTAAT
Suggested primer 2:GCTATAGCAGAGCTGGGGTG