Insertion junction: LMJ.RY0402.228966_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.228966
Chromosome:chromosome 4
Location:3949514
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g231222 CPN60A,CPN60 alpha Chaperonin 60A; (1 of 1) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTGCTGGCGCGCACCCGCCACGAGCT
Internal bar code:TGATGACCCGTCAAAGGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:98.4326
LEAP-Seq n confirming:314
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAAAAGCTTGGGACCGTG
Suggested primer 2:TGTTGTGAATACCAGCCCAA