Insertion junction: LMJ.RY0402.229055_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.229055
Chromosome:chromosome 15
Location:776606
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre15.g640101 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGGGATCTCGGTTTGTTGCACACCCTT
Internal bar code:GCAGGTACCGAAACGGGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:92.5504
LEAP-Seq n confirming:1789
LEAP-Seq n nonconfirming:144
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTAGGCAGTGCATGGGTT
Suggested primer 2:TGCTGGTATTTTTAACCCGC