Insertion junction: LMJ.RY0402.229213_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.229213
Chromosome:chromosome 12
Location:4481795
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTAGGCCTTTCTGCCTGCGCCCGCAC
Internal bar code:TCCGGGTGCTCCCCGCAGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:99.5736
LEAP-Seq n confirming:467
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTAGCGCACGCTGTAG
Suggested primer 2:CCTGCCTTAGTTGCTTCCAG