Insertion junction: LMJ.RY0402.229215_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.229215
Chromosome:chromosome 4
Location:3610921
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g228625 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCCCTGCCACGAGAGCAAGTGACAGC
Internal bar code:GGGACGGGTAGCAACCGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:99.478
LEAP-Seq n confirming:3430
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGAAATGGGCGTGTGTT
Suggested primer 2:AGTACAGCACATTCCCCCTG