Insertion junction: LMJ.RY0402.229226_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.229226
Chromosome:chromosome 17
Location:6214823
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACGCTGCTGGGGCCCGCGGCACAAACC
Internal bar code:TGGGAGAAGACAGATCGTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:631
LEAP-Seq percent confirming:99.3918
LEAP-Seq n confirming:1961
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAGCACGTCGATAAGC
Suggested primer 2:AAAGCCTGGTACGTGTGGAC