Insertion junction: LMJ.RY0402.229266_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.229266
Chromosome:chromosome 1
Location:2454620
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGAGCCTAGACCGCCTGGTGCCAGG
Internal bar code:CTTCTAGGCTAGAGTGTGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:98.9917
LEAP-Seq n confirming:1669
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGCACCATTCCACAGT
Suggested primer 2:TGAGATGACCAAGCTGTTGC