Insertion junction: LMJ.RY0402.229271_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.229271
Chromosome:chromosome 3
Location:2059278
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCACGCCGGGTGAGCAGCAACAGCAAC
Internal bar code:CCTCCCTTGTCTTGCGCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:77.1746
LEAP-Seq n confirming:111870
LEAP-Seq n nonconfirming:33087
LEAP-Seq n unique pos:291

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGCGTTTGTGTGT
Suggested primer 2:GGAGGGACAACAGGACAAAA