Insertion junction: LMJ.RY0402.229291_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.229291
Chromosome:chromosome 5
Location:2619364
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCCCATGCCACAAAACCTCCTGGTCG
Internal bar code:GATCCACCCCATAAGTATCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:99.3976
LEAP-Seq n confirming:165
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTCGAGGCAATAGCTGC
Suggested primer 2:ACGGGATTGGTGAATGTGTT