Insertion junction: LMJ.RY0402.229456_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.229456
Chromosome:chromosome 9
Location:5701762
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401552 (1 of 2) IPR000104//IPR002893//IPR003072 - Antifreeze protein, type I // Zinc finger, MYND-type // Orphan nuclear receptor, NOR1 type CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGTCGAGGGTGGAAGGGCGCCTGG
Internal bar code:ACGTATAGTTTTACACACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:3.28581
LEAP-Seq n confirming:242
LEAP-Seq n nonconfirming:7123
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCATCCTAAGCCAAAG
Suggested primer 2:CTGTCGATCCCGGACATAGT