Insertion junction: LMJ.RY0402.229524_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.229524
Chromosome:chromosome 9
Location:6842558
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGGCATCAGCAGGTGCGGCGGGGGTG
Internal bar code:TTTGCACGCGCGTCTTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:348
LEAP-Seq percent confirming:99.4264
LEAP-Seq n confirming:5027
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTACAACTCCCCCTGCAGTC
Suggested primer 2:ATCAAAGATCCCGCTGTCAC