Insertion junction: LMJ.RY0402.229591_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.229591
Chromosome:chromosome 3
Location:2501690
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g159800 (1 of 1) PTHR21262//PTHR21262:SF0 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTATCACCGTCACACTTCCGAGACAC
Internal bar code:AGGCGCGCACTACACAGTCGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:98.4167
LEAP-Seq n confirming:1554
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCCTAGGTAGTGGTGGC
Suggested primer 2:CTCACAGCGCATGGAATCTA