Insertion junction: LMJ.RY0402.229826_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.229826
Chromosome:chromosome 9
Location:531878
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g404000 CPLD59 (1 of 1) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide); thylakoid lumenal 17.4 kDa protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCGACAGGAGAAACACAACCACCGACC
Internal bar code:GCCGATTTTCCGTGGCCCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:99.3392
LEAP-Seq n confirming:1804
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCTACCCACCGGTCTT
Suggested primer 2:GGCGTTCATGTCTACAGGGT