Insertion junction: LMJ.RY0402.229826_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.229826
Chromosome:chromosome 9
Location:531889
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g404000 CPLD59 (1 of 1) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide); thylakoid lumenal 17.4 kDa protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGAGAGGAGGCCGCGCTGCTCTTCCTCA
Internal bar code:CACTGATCGACATACTCGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:98.8304
LEAP-Seq n confirming:338
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCTACCCACCGGTCTT
Suggested primer 2:GGCGTTCATGTCTACAGGGT