Insertion junction: LMJ.RY0402.230016_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.230016
Chromosome:chromosome 7
Location:4213967
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g342050 NPSN1,VTI3 (1 of 1) K08494 - novel plant SNARE (NSPN); Endosomal Qb-SNARE, Npsn-family (plant/protist-specific) (Qb.III.d) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACCATGAAATTCATTCTACTACTGT
Internal bar code:AGAGCCGCGGAAAAAAGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:356
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTGGAGTCGTCAGTCC
Suggested primer 2:CCTTTGTCCCTTCTGTCTGC