Insertion junction: LMJ.RY0402.230020_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.230020
Chromosome:chromosome 16
Location:290757
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGAAGCTCAAGAGGGAGGGGCGGGAGC
Internal bar code:GAGGTGGTCCACATAGAGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:98.3105
LEAP-Seq n confirming:931
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTTGCATGCGTGTCTT
Suggested primer 2:ATTGCGGCTACACACCTACC