Insertion junction: LMJ.RY0402.230213_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.230213
Chromosome:chromosome_17
Location:1621336
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre17.g708000 FAP260 Flagellar Associated Protein, membrane-associated sense CDS

Insertion site details

Flanking sequence (orientation from cassette outwards):TTCTTCAGCGTCAGGTACGAGTACGTGTAG
Internal bar code:ATTTACGCCGTTTTGCCAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1061
LEAP-Seq percent confirming:99.5725
LEAP-Seq n confirming:4658
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAACAGTCTGTGGCTGA
Suggested primer 2:AAAATAGGATTTGGGGTCGC