Insertion junction: LMJ.RY0402.230350_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.230350
Chromosome:chromosome 7
Location:1131943
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g320350 CDJ5 (1 of 3) PF00226//PF13370 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain of Ferredoxin I (Fer4_13); Chloroplast DnaJ-like protein 5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGTAAAACTGTTATGCACGCCACGGC
Internal bar code:AACCCCCAGTGTCTTCTTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:99.6276
LEAP-Seq n confirming:2140
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATTGCGCCTAAGCATT
Suggested primer 2:GATAGCGTGCGAAGCACATA