Insertion junction: LMJ.RY0402.230380_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.230380
Chromosome:chromosome 3
Location:8202353
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGGGTTTGGCGTGTTGGAGTGGTGAGC
Internal bar code:TCGTTTATATCGCCAAACTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1103
LEAP-Seq percent confirming:98.0243
LEAP-Seq n confirming:13644
LEAP-Seq n nonconfirming:275
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AAAATGGGAGACACGCAAAC
Suggested primer 2:GTAGATGCGGAGCTTTGGAG