Insertion junction: LMJ.RY0402.230660_5

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.230660
Chromosome:chromosome 11
Location:1102752
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g467678 COP6,HKR2 (1 of 5) IPR001660//IPR013761 - Sterile alpha motif domain // Sterile alpha motif/pointed domain; Histidine cyclase rhodopsin 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTGTTGGGTGGAACAAATGCGATGGCC
Internal bar code:GCCGCAGCGGTGTCCAGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:91.7557
LEAP-Seq n confirming:1202
LEAP-Seq n nonconfirming:108
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGCCAAAGGGTGTTT
Suggested primer 2:CTGGCAAAGAAGGAGGTGAG