Insertion junction: LMJ.RY0402.230663_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.230663
Chromosome:chromosome 9
Location:528354
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g404000 CPLD59 (1 of 1) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide); thylakoid lumenal 17.4 kDa protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCTACCGTATCCAGCATCGGACGCTGC
Internal bar code:TTGGGTTACCCGGGTCGTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:98.8861
LEAP-Seq n confirming:7191
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGAGCCTTTCATTCCT
Suggested primer 2:GCGTAGCAAGAAGGGACAAG