Insertion junction: LMJ.RY0402.231055_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.231055
Chromosome:chromosome 2
Location:5762503
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g110600 DEG5 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTGTCGCCGGATGCAAAACAACACAC
Internal bar code:AATCGTCCGGCCGCAGCCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:496
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGTGACGAGGTTTGGT
Suggested primer 2:CCTTTGAGCAACTGTGCGTA