Insertion junction: LMJ.RY0402.231096_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.231096
Chromosome:chromosome 7
Location:515227
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGGGTGAGGATGCTACTGGCCAACTGC
Internal bar code:CCGGGTGTGCCTTGGTCCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:92.0673
LEAP-Seq n confirming:766
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGTGTTCATATGTGCCT
Suggested primer 2:TTGTGCTCTAAAGCCCCAAC