Insertion junction: LMJ.RY0402.231176_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.231176
Chromosome:chromosome 9
Location:4712592
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g397031 (1 of 6) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCTGCTGCCCCCAGCTTATTTCCCAGC
Internal bar code:TGGACGTACATCTGTGTAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:97.7528
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCGGCTCAGTAGATGC
Suggested primer 2:CGGTGTGTGTGTGTGTGTGT