Insertion junction: LMJ.RY0402.231225_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.231225
Chromosome:chromosome 4
Location:1245093
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCTACCCAACCCCCACCACCACCGC
Internal bar code:ATTGGAAGCCATGGTCCATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCACCACTGACTCTTG
Suggested primer 2:CAGAGAAGTGTAGCGAGGGG