Insertion junction: LMJ.RY0402.231270_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.231270
Chromosome:chromosome 1
Location:3365472
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g021300 (1 of 2) IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATTTGCGGTGGCTGAGGGGTGCTACTGC
Internal bar code:CGACAGGACAACGCAGGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:98.9542
LEAP-Seq n confirming:757
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACAACCACTCACAACCG
Suggested primer 2:TTTTATTGGCGTTGTGGTGA