Insertion junction: LMJ.RY0402.231455_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.231455
Chromosome:chromosome 10
Location:3994098
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g448900 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTGCCTGCCTGTCAGCATGTCGCCTGT
Internal bar code:GACGGGGCGGGAAGTTAAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:97.3505
LEAP-Seq n confirming:1286
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCCTTCGTCATCAACA
Suggested primer 2:GTGGTGATAGGGGCACTGTT