Insertion junction: LMJ.RY0402.231728_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.231728
Chromosome:chromosome 3
Location:2596483
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g160600 (1 of 1) IPR000104//IPR000679//IPR013088 - Antifreeze protein, type I // Zinc finger, GATA-type // Zinc finger, NHR/GATA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCTTGGGTAGCTCTCGCTGTTTAGCTT
Internal bar code:CGTGACTCGGTCAGTTGACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:555
LEAP-Seq percent confirming:98.0186
LEAP-Seq n confirming:841
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGTCATAGGTGCTGTC
Suggested primer 2:ACAATCGACACCCTCTGACC