Insertion junction: LMJ.RY0402.232101_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.232101
Chromosome:chromosome 16
Location:560671
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGGCAAAACTGCACCGTCACAAAAGT
Internal bar code:GGGTGCGAGAATGGGGGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCTAGCGGCTGGAACTT
Suggested primer 2:GCGCGAAGAAAAACTATTCG