Insertion junction: LMJ.RY0402.232201_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.232201
Chromosome:chromosome 16
Location:1133388
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATTCGAGTTGGGGCCCCCACGCAGTGG
Internal bar code:CAGACAGCCATAAGGCCACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:98.6667
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAGTGCTTGCTGTTTGA
Suggested primer 2:AACACATGTTCAGGCTTCCC