Insertion junction: LMJ.RY0402.232204_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.232204
Chromosome:chromosome 12
Location:4076207
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTGCGGCATGTGAAGCGGCCAGCCGCA
Internal bar code:ACCGAAGCCGGGGCCCTTACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTTGTACTCACCTGCG
Suggested primer 2:AATACCCCGCTTGTCAACAG