Insertion junction: LMJ.RY0402.232280_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.232280
Chromosome:chromosome 17
Location:3292531
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g723100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTCGGCCCGCTGGAATTGACCCTAAG
Internal bar code:ACCTGGGGCGGCCCTGTGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:98.8713
LEAP-Seq n confirming:438
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAAGAGCCTGGAGGGGAA
Suggested primer 2:ACCCTTCATGAATGCTCCAC