Insertion junction: LMJ.RY0402.232402_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.232402
Chromosome:chromosome 6
Location:2430326
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g268550 GTR,CGL121,CSL1 Cellulose-synthase-like 1; (1 of 1) 2.4.1.32 - Glucomannan 4-beta-mannosyltransferase / Glucomannan-synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAACCGGCGTTCCTGCTACACCAGCTTG
Internal bar code:GCTGCTCGGTTCTCCCCCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:99.4519
LEAP-Seq n confirming:18326
LEAP-Seq n nonconfirming:101
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCATTCGGAGCATTCA
Suggested primer 2:TGCTGCAGAACTCGCTACTG