Insertion junction: LMJ.RY0402.232444_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.232444
Chromosome:chromosome 8
Location:2386176
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g371000 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGTTCACCGTTCCCAAGTACAGGTTA
Internal bar code:CGCTCCCTCATCCCTCGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:91.3907
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATGCACTATGCACCAC
Suggested primer 2:TGGAAGAGTACTTGGGTGGG