Insertion junction: LMJ.RY0402.232681_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.232681
Chromosome:chromosome 3
Location:8418351
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g199199 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCCAGTCCAACTGGATAGCTAGACAC
Internal bar code:TGGTGGAGGCGCATTGGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:98.2857
LEAP-Seq n confirming:344
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATCCAGCATTGTGTGTG
Suggested primer 2:ATGTCGTGAGGCTATGTCCC