Insertion junction: LMJ.RY0402.232719_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.232719
Chromosome:chromosome 4
Location:1867351
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATGAATGTAATCCCCCCCTCGCAGTG
Internal bar code:AAGTCCCCCAGTCCGCAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:25.3674
LEAP-Seq n confirming:3107
LEAP-Seq n nonconfirming:9141
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTTGGATTTCGACAACA
Suggested primer 2:TGCCGCTACTGATACTGCTG