Insertion junction: LMJ.RY0402.232742_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.232742
Chromosome:scaffold 18
Location:92846
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre18.g748647 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACCGGTAGTAATTCCGCAAGGGTTAC
Internal bar code:CCTAGGTCTGTGTTAGAATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:643
LEAP-Seq percent confirming:42.2727
LEAP-Seq n confirming:1860
LEAP-Seq n nonconfirming:2540
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATCGCCTTGGCATTAAA
Suggested primer 2:GTACCCTTTTGGACCAAGCA