Insertion junction: LMJ.RY0402.232955_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.232955
Chromosome:chromosome 9
Location:2788433
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGCTGTAACAGAGCATCCTTTTCGGA
Internal bar code:GGTTAATCCCGGTCGCAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:405
LEAP-Seq percent confirming:99.3678
LEAP-Seq n confirming:2515
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGATGTCGGGTGTTGTG
Suggested primer 2:AGTTTGTCTGGTTCTGCGCT