Insertion junction: LMJ.RY0402.233021_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.233021
Chromosome:chromosome 2
Location:5764384
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g110600 DEG5 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTGGGGGCGCGCGTGGCCGGCACGGAC
Internal bar code:TTACTATGTACGCCGCGAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:668
LEAP-Seq percent confirming:91.2855
LEAP-Seq n confirming:2315
LEAP-Seq n nonconfirming:221
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACACAAATCGCTGCACT
Suggested primer 2:GTACAACAGGCAGGATCGGT