Insertion junction: LMJ.RY0402.233093_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.233093
Chromosome:chromosome 9
Location:4262231
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g394547 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGGCCCAGTACGTCCCAGTCACAACC
Internal bar code:ATAACGCACACTCGACGTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:91.5583
LEAP-Seq n confirming:3167
LEAP-Seq n nonconfirming:292
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGATTGGAATGATGCG
Suggested primer 2:CCGTACCACAAACTCCGTCT