Insertion junction: LMJ.RY0402.233143_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.233143
Chromosome:chromosome 8
Location:4553017
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTGCACCACGCTGCCCTGCAGCGGCA
Internal bar code:TAGGTACGCGCCGCGGGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:91.4894
LEAP-Seq n confirming:172
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCTGACGAGACCCGAG
Suggested primer 2:GTTCGCATCGCCTACTTCTC