Insertion junction: LMJ.RY0402.233401_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.233401
Chromosome:chromosome 6
Location:3688711
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278141 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAAGTGGCGGAGGCGGCGTGCGAGGGC
Internal bar code:GTAGGCGATTTTAGCTGCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:71.529
LEAP-Seq n confirming:407
LEAP-Seq n nonconfirming:162
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACGGTGAAGGTCAACAC
Suggested primer 2:CCACCTCCGTGCTTATCAAT