Insertion junction: LMJ.RY0402.233415_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.233415
Chromosome:chromosome 12
Location:6111058
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g535800 (1 of 1) PF13191//PF13424 - AAA ATPase domain (AAA_16) // Tetratricopeptide repeat (TPR_12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTCCGCACCCCCGCTTCTGCTCCTCC
Internal bar code:TCGGGATAACACGATCAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:159
LEAP-Seq percent confirming:60.16
LEAP-Seq n confirming:376
LEAP-Seq n nonconfirming:249
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGCTGGTGGACTATGA
Suggested primer 2:GAAGCAGAAATGGGATGGAA