Insertion junction: LMJ.RY0402.233474_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.233474
Chromosome:chromosome 16
Location:4670520
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g687300 CPLD61 Conserved in the Plant Lineage and Diatoms; (1 of 3) PF13599 - Pentapeptide repeats (9 copies) (Pentapeptide_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGGGCATGCAAGTTTAACTGAAACGA
Internal bar code:CACTTAGGTCAGCGGGAAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:97.2112
LEAP-Seq n confirming:1220
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCAACTGCTGCTGCTT
Suggested primer 2:TGCTTCATGGCATAATTGGA