Insertion junction: LMJ.RY0402.233511_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.233511
Chromosome:chromosome 9
Location:531595
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g404000 CPLD59 (1 of 1) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide); thylakoid lumenal 17.4 kDa protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAACTGGATAATATGCGCACCAGCGTTC
Internal bar code:CGGGAAGTTGGCAGGCGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:608
LEAP-Seq percent confirming:98.5832
LEAP-Seq n confirming:2157
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCGGTAAAGCAGCAGT
Suggested primer 2:GGCGTTCATGTCTACAGGGT