Insertion junction: LMJ.RY0402.233572_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.233572
Chromosome:chromosome 5
Location:3414915
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g241202 (1 of 3) 3.4.22.53 - Calpain-2 / Milli-calpain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGAGGAGTAGCACGACGTGTGTGGG
Internal bar code:TCCAAGGCGAGGTACCTGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:99.6644
LEAP-Seq n confirming:297
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCAATCATTTGTTGCGA
Suggested primer 2:ATGGGCGATGTAAGCAAGTC