Insertion junction: LMJ.RY0402.233653_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.233653
Chromosome:chromosome 3
Location:5927404
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g190150 CGL1 (1 of 2) PF11833 - Protein of unknown function (DUF3353) (DUF3353); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGTTGCCGCGGGAACGCAAAGGCATGA
Internal bar code:AGTCTGCCGGCCGATCCTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:99.2453
LEAP-Seq n confirming:526
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCCAACCAGTATTCCT
Suggested primer 2:ACTGCGATGCATACAAGCAC