Insertion junction: LMJ.RY0402.233653_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.233653
Chromosome:chromosome 3
Location:5927429
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g190150 CGL1 (1 of 2) PF11833 - Protein of unknown function (DUF3353) (DUF3353); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCTCAACCCCAGAACTTCGGCTCGCC
Internal bar code:CAGCGCATATGCTGCTTGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:99.7676
LEAP-Seq n confirming:1717
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCCAACCAGTATTCCT
Suggested primer 2:ACTGCGATGCATACAAGCAC