Insertion junction: LMJ.RY0402.233783_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.233783
Chromosome:chromosome 7
Location:5936988
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g354250 PGK2 (1 of 2) PF00162 - Phosphoglycerate kinase (PGK); Phosphoglycerate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGACGGGATCTAACAGTCCCCTCGGTG
Internal bar code:TGTGGCCTGAAACAGGGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:97.3958
LEAP-Seq n confirming:1309
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACCCACATCTCCACAG
Suggested primer 2:ACCTGTACCAGTTGCCCAAG